Factor                  Construction of Variable Factors
SeqMADE-package         Network Module-Based Model in the Differential
                        Expression Analysis for RNA-Seq
exprs                   Gene Expression Dataset
moduleMatrix            Modulematrix Construction
nbGLM                   Identify Differential Expression Modules Based
                        on the Generalized Linear Model
nbGLMdir                Identify Differential Expression Modules Based
                        on the GLM Model with Up or Down-regulated
                        Change
nbGLMdirperm            Identify Differential Expression Modules Based
                        on the GLM Method by Shuffling the Phenotypic
                        Variables
networkModule           NetworkModule
