Package: quicR
Title: RT-QuIC Data Formatting and Analysis
Version: 2.1.0
Authors@R: 
    person(
      given = "Gage",
      family = "Rowden",
      email = "gage.rowden1145@gmail.com",
      role = c("aut", "cre"),
      comment = c(ORCID = "0000-0002-7517-0480")
    )
Description: 
  Designed for the curation and analysis of data generated from real-time quaking-induced conversion (RT-QuIC) assays first described by Atarashi et al. (2011) <doi:10.1038/nm.2294>. 'quicR' calculates useful metrics such as maxpoint ratio: Rowden et al. (2023) <doi:10.1099/vir.0.069906-0>; time-to-threshold: Shi et al. (2013) <doi:10.1186/2051-5960-1-44>; and maximum slope. Integration with the output from plate readers allows for seamless input of raw data into the R environment.
Imports: dplyr, ggplot2, janitor, openxlsx, purrr, readxl, reshape2,
        slider, stats, stringr, tidyr
Depends: R (>= 4.1.0)
License: GPL-3
Encoding: UTF-8
RoxygenNote: 7.3.2
Suggests: testthat (>= 3.1.0)
Config/testthat/edition: 3
NeedsCompilation: no
Packaged: 2025-02-26 19:16:47 UTC; rowde002
Author: Gage Rowden [aut, cre] (<https://orcid.org/0000-0002-7517-0480>)
Maintainer: Gage Rowden <gage.rowden1145@gmail.com>
Repository: CRAN
Date/Publication: 2025-02-26 19:30:02 UTC
Built: R 4.3.3; ; 2025-02-26 21:10:47 UTC; unix
