%-%                     Minus names
Adj.Rand                Adjusted Rand index
Aggregate1              Aggregates by one vector and uses it for row
                        names
Alldups                 Finds all duplicates
Bclabels                Plot bootstrap values
Bclust                  Bootstrapped hclust
BestOverlap             Calculates the best overlap
Biarrows                Adds correlation arrows to the scatterplot
Biokey                  Convert diagnostic keys and classification
                        lists
BootA                   Bootstrap clustering
BootKNN                 Bootstrap with kNN
BootRF                  Bootstrap with 'randomForest()'
Boxplots                Grouped boxplots
CVs                     Coefficients of variation
Cdate                   System date, time plus easy save history
Cladd                   Adds confidence bands to the simple linear
                        model plots
Class.sample            Samples along the class labels
Classproj               Class projection
Clustergram             Clustergram: visualize the cluster structure
Coeff.det               Average coefficients of determination for each
                        variable
Coml                    Compare checklists
Cor                     Correlation matrix with p-values
Cor.vec                 Calculates correlation and converts results
                        into the named long vector
DNN                     Distance matrix based kNN classification
Ditto                   Removes duplicated data values downstream
Dotchart                Improved dotcharts
Ell                     Plot ellipse
Ellipses                Confidence ellipses
Ex.boxplot              Boxplot explanation
Ex.col                  Examples of colors
Ex.font                 Examples of fonts
Ex.lty                  Examples of line types
Ex.margins              Example of plot margins
Ex.pch                  Point examples
Ex.plots                Examples of plot types
Fence                   Colorize tips of 'hclust' plot
Files                   Textual file system browser
Fill                    Fill data values downstream, like in
                        spreadsheets
Gap.code                Gap coding
Gen.cl.data             Generates datasets for clustering
Gini                    Compute the simple Gini coefficient
Gower.dist              Gower distance
Gradd                   Classification grid and decision boundaries
Gridmoon                Draw with 'R'
Hcl2mat                 Clustering to matrix
Hclust.match            Counts matches between two hierarchical
                        clusterings
Hcoords                 Calculates coordinates of nodes from 'hclust'
                        plot
Histr                   Histogram with overlaid curve
Hulls                   Convex hulls for multiple groups
Infill                  Rarefaction curves
Jclust                  Simple bootstrap and jackknife clustering
K                       Coefficient of divergence
Life                    Game of Life
Linechart               Dotchart-like plot sfor every scaled variable
                        grouped by factor
Ls                      Ls
MDSv                    MDS: dimension importance ("explained variance"
                        surrogate)
MRH                     Matrix Representation of Hierarchical
                        Clustering
Mag                     Interpreter for effect sizes
Miney                   Miney game
Misclass                Misclassification (confusion) table
Missing.map             Textual plot of missing data
MrBayes                 Calls MrBayes
NC.dist                 Normalized Compression Distance
Normality               Check normality
Overlap                 Calculates overlap between polygons
Phyllotaxis             Plant phyllotaxis
Pinhull                 Point in hull
Pleiad                  Correlation circles (correlation pleiads)
Plot.phylocl            Plot phylogenetic tree with clades collapsed
PlotBest.dist           Dotchart which reflects the "best" base
                        distance method
PlotBest.hclust         Plots dotchart with best clustering method
PlotBest.mdist          Dotchart which reflects the "best" of non-base
                        distances
Ploth                   Changes the appearance of cluster dendrogram
Points                  Number of cases in each location reflected in
                        the point size
Polyarea                Area of the polygon
Polycenter              Center of the polygon
Pull                    Select rows from data frame
R.logo                  Imitation (!) of the modern 'R' logo
Read.fasta              Read 'FASTA' files
Read.tri.nts            Read 'NTSYSpc' files
Recode                  Basic multiple recoding
Root1                   Roots phylogenetic trees even if outgroup is
                        not monophyletic
Rostova.tbl             Calculates multiple correlation matrices (via
                        'factor1') and stacks them together
Rpart2newick            Converts 'rpart' object into Newick tree
Rresults                Rresults shell script
Rro.test                Robust rank order test
S.value                 S-value
SM.dist                 Simple Match distance
Saynodynamite           Say "no" to dynamite plots!
Squares                 Areas of polygons
Str                     'str()' enchanced for data frames
Table2df                Convert table to data frame saving structure
Tcoords                 Calculates coordinates of tips from 'hclust'
                        plot
Tctext                  Easy way to add text labels to 'hclust' plot
Tobin                   Binarize (make dummy variables)
Toclip                  Insert content to Linux X11 clipboard
Topm                    Stacks correlation matrix
Ttcols                  Text-to-columns
Updist                  Educated distances for semi-supervised
                        clustering
VTcoeffs                Effect sizes of association between categorical
                        variables
Vicinities              Arrange observations by the distance from
                        center
Write.fasta             Write 'FASTA' files
Xpager                  Separate terminal pager for Linux
atmospheres             atmospheres
chaetocnema             Chaetocnema flea beetles
classifs                Classification lists
dolbli                  dolbli
drosera                 drosera
eq                      eq
haltica                 Haltica flea beetles
hrahn                   Angiosperm families: morphological characters
hwc                     hwc
keys                    Diagnostic keys
moldino                 moldino
pairwise.Eff            Pairwise table of effects with magnitudes
pairwise.Rro.test       Robust rank order test post hoc derivative
pairwise.Table2.test    Pairwise Chi-squared or Fisher test for
                        2-dimensional tables
plantago                plantago
salix_leaves            salix_leaves
