# Generated by roxygen2: do not edit by hand

export(MeanSiteFChange_cherry)
export(categorize_islandGlbSt)
export(categorize_siteMethSt)
export(compare_CherryFreqs)
export(computeFitch_islandGlbSt)
export(compute_fitch)
export(compute_meanCor_i)
export(compute_meanCor_ni)
export(countSites_cherryMethDiff)
export(freqSites_cherryMethDiff)
export(get_cherryDist)
export(get_islandMeanFreqM)
export(get_islandMeanFreqP)
export(get_islandSDFreqM)
export(get_islandSDFreqP)
export(get_meanMeth_islands)
export(get_nonislandMeanFreqM)
export(get_nonislandMeanFreqP)
export(get_nonislandSDFreqM)
export(get_nonislandSDFreqP)
export(get_parameterValues)
export(get_siteFChange_cherry)
export(mean_CherryFreqsChange_i)
export(mean_TreeFreqsChange_i)
export(pValue_CherryFreqsChange_i)
export(simulate_evolData)
export(simulate_initialData)
importFrom(R6,R6Class)
importFrom(ape,cophenetic.phylo)
importFrom(ape,read.tree)
