Type: Package
Package: cuperdec
Title: Cumulative Percent Decay Curve Generator
Version: 1.1.0
Authors@R: 
    person(given = "James A.",
           family = "Fellows Yates",
           role = c("aut", "cre"),
           email = "jfy133@gmail.com",
           comment = c(ORCID = "0000-0001-5585-6277"))
Description: Calculates and visualises cumulative percent 'decay' curves,
    which are typically calculated from metagenomic taxonomic profiles.
    These can be used to estimate the level of expected 'endogenous' taxa
    at different abundance levels retrieved from metagenomic samples, when
    comparing to samples of known sampling site or source. Method
    described in Fellows Yates, J. A. et. al. (2021) Proceedings of the
    National Academy of Sciences USA <doi:10.1073/pnas.2021655118>.
License: MIT + file LICENSE
URL: https://github.com/jfy133/cuperdec
BugReports: https://github.com/jfy133/cuperdec/issues
Depends: R (>= 3.5.0)
Imports: dplyr, ggplot2, magrittr, readr, rlang, tidyr
Suggests: knitr, rmarkdown, testthat, tibble
VignetteBuilder: knitr
Encoding: UTF-8
Language: en-GB
LazyData: true
NeedsCompilation: no
RoxygenNote: 7.1.2
Packaged: 2021-09-12 18:12:11 UTC; jfellows
Author: James A. Fellows Yates [aut, cre]
    (<https://orcid.org/0000-0001-5585-6277>)
Maintainer: James A. Fellows Yates <jfy133@gmail.com>
Repository: CRAN
Date/Publication: 2021-09-12 21:40:10 UTC
Built: R 4.4.3; ; 2025-12-05 04:54:27 UTC; windows
