c7b5ececc7bb8547c34f5b57b9765da7 *DESCRIPTION
1ebbd3e34237af26da5dc08a4e440464 *LICENSE
b4b8c0fca363c4508e0081b55f633f42 *NAMESPACE
551ab79499b09bb233ea892110f83e06 *NEWS.md
a4857edcb4c36dbd7ba93688ca64b7f1 *R/ConsensusLoops.R
3146d76c65cdf10405c6e14f1d1ed75a *R/DropLoops.R
878a1d5d3d527778e299bf99084d052d *R/ElementsToRanges.R
5d1a01875cd187a8f96f883d29eb1a77 *R/ExportBED.R
e14ccc4958bd759cac8fac7c44349e9e *R/LinkedElements.R
677fc8a50eeb48831602ac108c2fbac8 *R/LoopsToRanges.R
95bed476931e191472c818cbefd731cc *R/ScaffoldElements.R
29f4fef751e7f956f73f255b09cd058c *R/StackedElements.R
dab773e669ae49d86b04daeb5191ac53 *README.md
62f4a55dd8792c1d54f31a53d8102fd0 *build/vignette.rds
8686c176532c09cc58ba36d7df69d753 *inst/doc/LoopRig-Tutorial.R
7a01ebc5b4b225448aac778f0382efad *inst/doc/LoopRig-Tutorial.Rmd
e90e59e42e5b6a5d5e47b0bfec968a39 *inst/doc/LoopRig-Tutorial.html
3b7f85e31bdf278d0e3fdc53d3d599d3 *inst/extdata/elements/enhancers.bed
d41d8cd98f00b204e9800998ecf8427e *inst/extdata/elements/exp_bed_dummy.bed
0179670055ffc1dff7191f29815205d4 *inst/extdata/elements/promoters.bed
d41d8cd98f00b204e9800998ecf8427e *inst/extdata/loops/exp_bed_dummy.bed
a8b72c46fd21876c12bc92af1ff22dc8 *inst/extdata/loops/ovary_hg19.bedpe
96b9dff0bb2205f0c94f4e6d534892fb *inst/extdata/loops/ovary_hg19_mcol.bedpe
734c9c30933377a16f26b60ad0fd54c2 *inst/extdata/loops/pancreas_hg19.bedpe
734537cc38dd08f215144fc221a352bf *inst/extdata/loops/spleen_hg19.bedpe
2f347fcfec398956120432cdf18cdf1e *man/ConsensusLoops.Rd
d6d7a8bb62ef9c26203dbdb00cf81308 *man/DropLoops.Rd
0b28c4964796083317693646bd2af8be *man/ElementsToRanges.Rd
1dc1c0a2e17c28d13613ca7c7552620e *man/ExportBED.Rd
019b9ba20d7d1ac9d329c1823f53eef2 *man/LinkedElements.Rd
004403c26e47aaec824314083b246069 *man/LoopsToRanges.Rd
a4f77828748fb3c6ab99cbc65e96b602 *man/ScaffoldElements.Rd
05538440edddd32b504453236caedd34 *man/StackedElements.Rd
95dee278497aeafeae991d1cb81b4030 *man/figures/looprig_logo.png
a50da986d65e31eb720e88141dd0e349 *tests/testthat.R
c023440092ae1b49722ca0139644ff81 *tests/testthat/test-ConsensusLoops.R
cdb2ca7d82fd85eb36e3b26d7191aa53 *tests/testthat/test-DropLoops.R
013ba62025b226fbf5487f411216f78c *tests/testthat/test-ElementsToRanges.R
054c2336a9a657390e217a9285cf5a84 *tests/testthat/test-ExportBED.R
be9146c869739c32796f1fe5ea378c2f *tests/testthat/test-LinkedElements.R
f5b14eb8fc754ecea518a7c7ac33db81 *tests/testthat/test-LoopsToRanges.R
b30fec921c40f90112a9243c18878cb2 *tests/testthat/test-ScaffoldElements.R
228cbf1f0d0101e66509ecf0c85f7c70 *tests/testthat/test-StackedElements.R
7a01ebc5b4b225448aac778f0382efad *vignettes/LoopRig-Tutorial.Rmd
