a74daf1756901a0e4425dc2e53670a38 *DESCRIPTION
ab1dded1d403088486b5a5c36d56222f *NAMESPACE
7b0393f224e43d40837d82a2316e1b01 *NEWS.md
bdbe9579401a5cf9b100016d865ff5a1 *R/KSoftImpute.R
5d1c267d4b80a0f3fb3cc571e6ce6b66 *R/MASC.R
9cbd891ce98b046d9a9d0455cddbb06e *R/ModelGenerator.R
8d2d46a06958ef52ee670cd69d8d56e2 *R/Signac.R
bf126ad5166c01db0f8cd5c4804b44ec *R/SignacFast.R
213fe874dfd0fa3f12832217cf4edd1b *R/data.R
e1bbd5e677497204e251fec714ff42be *R/helper_functions.R
2caa3d954c91a5bcfc17807ea0f73443 *README.md
4778038e5faaa2c09b2dee9568fe98a7 *build/vignette.rds
69abfdb8587c88d2b13c302fd7e5e406 *data/Genes_Of_Interest.rda
b92e427757133f816da7c40590e0c3a5 *inst/CITATION
47808f15d315690865815d2884e2116b *inst/doc/Crabeating_vignette.Rmd
ed3364913ea6a5430e350f3e0739dd01 *inst/doc/Crabeating_vignette.html
9afb4b0bb101feb3e37823e8a07fd69e *inst/doc/SignacFast-Seurat_AMP_RA.Rmd
6189cb00fa9c9773cc505981cbc0a80d *inst/doc/SignacFast-Seurat_AMP_RA.html
c4cb0ed9c16684c09f9c5926776483aa *inst/doc/signac-SPRING_Learning.Rmd
b9ccf2961831f81ae775f761fce4fd04 *inst/doc/signac-SPRING_Learning.html
9b0663dff59724511bbb2797904e0970 *inst/doc/signac-Seurat_AMP.Rmd
42a97ab31bf6f785c357c0856cdb053d *inst/doc/signac-Seurat_AMP.html
28a67d313821b88c428f2157a12c59b9 *inst/doc/signac-Seurat_AMP_RA.Rmd
80c1ab59e2addd2f650e1be8c87ba610 *inst/doc/signac-Seurat_AMP_RA.html
4200d78a71a17cf0573407a6aed9a30c *inst/doc/signac-Seurat_CITE-seq.Rmd
0da46d8e3a84fa87d8c2fb2e36ea533b *inst/doc/signac-Seurat_CITE-seq.html
b1dfa3cbaca7d247aa7369b596d67f9f *inst/doc/signac-Seurat_pbmcs.Rmd
854bf2099a99b5c4c405b058bf1271ea *inst/doc/signac-Seurat_pbmcs.html
d3c72c37a7082e607191d382b0701325 *man/CID.GetDistMat.Rd
e463fa95f2d701dffcd421cce2bceab2 *man/CID.IsUnique.Rd
9392a41de8c7960f3b68e6a67cf99043 *man/CID.LoadData.Rd
7f43c49d681ba2c9ef09d7192fa50464 *man/CID.LoadEdges.Rd
e34f88b43fb17b9baf6821776601bc3b *man/CID.Louvain.Rd
fe7dbe93fa84dabfa859acaf5f0e3aba *man/CID.Normalize.Rd
1cbb7a87a0bcef092bdbb7ecbd731350 *man/CID.entropy.Rd
ac8fd4eae8b6b466e213a16cf66ca051 *man/CID.smooth.Rd
0920ddc4d437f8be890cff2f4cacb5e3 *man/CID.writeJSON.Rd
64e879876e292018277483eeed2574b9 *man/GenerateLabels.Rd
48defb05a3499251283d8302c8965b02 *man/Genes_Of_Interest.Rd
419be05bf917cfaa45180bebe831333e *man/GetModels_HPCA.Rd
b0b8173b1b4f5fbc291fffd4fc18db35 *man/GetTrainingData_HPCA.Rd
3873dc15425af43757b4583bf8b8e3a9 *man/KSoftImpute.Rd
127b16868e4cba997f1753550b843f16 *man/MASC.Rd
96d5649370f5278b2ede5cc24a744786 *man/ModelGenerator.Rd
d3ea8c7ef349803eeac5d9a8c32a316c *man/SaveCountsToH5.Rd
a47e4a2f12547a149df9a14e15cf96da *man/Signac.Rd
1d654608e89237727870d8dcf9847542 *man/SignacBoot.Rd
e18b3b2c5e408a151b777dcf7e9a5005 *man/SignacFast.Rd
dcd2ea4d224e60ef75729e12150c2a31 *man/get_colors.Rd
47808f15d315690865815d2884e2116b *vignettes/Crabeating_vignette.Rmd
9afb4b0bb101feb3e37823e8a07fd69e *vignettes/SignacFast-Seurat_AMP_RA.Rmd
58c10b6204463fa47d2171e8b43002e7 *vignettes/fls/SingleR_Results.rda
f5dc62fefe15b33bf30eb76d72feea91 *vignettes/fls/amp_kidney_MASC_result.rds
1ae114739e8232f1a99c269d9c0c8016 *vignettes/fls/amp_kidney_celltypes.rds
df3e911b8ca0015e13c628bbbe4f72fa *vignettes/fls/celltypes.rds
92e23c77f7b0f30a560422b94bdf7376 *vignettes/fls/celltypes_amp_synovium.rds
310997ffaf6ce80da2e3bb234fe7eb05 *vignettes/fls/celltypes_amp_synovium_true.rds
e72b76cddc657598d0c91b6c8a2b8868 *vignettes/fls/celltypes_citeseq.rds
ade805ae2826451052ddd9c29d22b048 *vignettes/fls/celltypes_fast.rds
685d7bfe1f6d8d88c5174ab979b2aee9 *vignettes/fls/celltypes_fast_citeseq.rds
65347bb01f30a89d46f17faad803c102 *vignettes/fls/celltypes_fast_synovium_celltypes.rds
4f55edd6121a8fe0d0b6d0dae1128db3 *vignettes/fls/features.tsv.gz
8d6b5db76b85b750798e47b796a711ef *vignettes/fls/orthologs.rds
9c9ed7ad3e7ba714c4a7d7f6b4c6b06f *vignettes/fls/plot1.png
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80676a6676c2e67bf60919b85c4e7145 *vignettes/fls/plot1_citeseq.png
94818d7bf79fe3ae7dfc743cbe15153b *vignettes/fls/plot2.png
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498e945b50d45f5a7ad373a23f6e5f22 *vignettes/fls/plot2_citeseq.png
0ebc551af45f8ef6ff1c6657ebc1d22f *vignettes/fls/plot3.png
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0aec56b5b21b7a441ca4f15a57ab7e26 *vignettes/fls/plot4.png
356a2ce08c2e31b279777e011de108b6 *vignettes/fls/plot4_amp.png
81b11b74ad3126fa15913a2247521d27 *vignettes/fls/plot4_citeseq.png
24b360fc68ae0c0b9cfdad1a41ea4651 *vignettes/fls/plot5.png
d0e08ed41654eba50974b1cc78b0ec8f *vignettes/fls/plot5_citeseq.png
06d97cfe24e623c993f1c8703c52e2be *vignettes/fls/plot6.png
1a0027160091cce853ab42793a4a4352 *vignettes/fls/plot6_citeseq.png
efe073a89875b841e32592d4c0be084d *vignettes/fls/plot7_citeseq.png
4ade8acaa3c9e3417824eefafeab8d94 *vignettes/fls/plot9_citeseq.png
80f8a7c718e0f64326e57f64e377feb0 *vignettes/fls/tutorial_times_Crabeating_vignette.csv
c4cb0ed9c16684c09f9c5926776483aa *vignettes/signac-SPRING_Learning.Rmd
9b0663dff59724511bbb2797904e0970 *vignettes/signac-Seurat_AMP.Rmd
28a67d313821b88c428f2157a12c59b9 *vignettes/signac-Seurat_AMP_RA.Rmd
4200d78a71a17cf0573407a6aed9a30c *vignettes/signac-Seurat_CITE-seq.Rmd
b1dfa3cbaca7d247aa7369b596d67f9f *vignettes/signac-Seurat_pbmcs.Rmd
